Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| femab family pep-cterm system-associated protein | PQ457_04185 | Not Available | + | 928128 - 929207 | 39175.7 |
| tigr03087 family pep-cterm/xrta system glycosyltransferase | PQ457_04190 | Not Available | + | 929230 - 930465 | 44911.4 |
| epsi family protein | PQ457_04195 | Not Available | + | 930462 - 932003 | 54134.4 |
| amidotransferase 1, exosortase a system-associated | PQ457_04200 | P54420 | + | 932015 - 933925 | 70029.3 |
| crotonase/enoyl-coa hydratase family protein | PQ457_04205 | B5FEW8 | + | 934123 - 935058 | 33750.5 |
| cell division protein zape | PQ457_04210 | P64613 | - | 935107 - 936246 | 42435.1 |
| hypothetical protein | PQ457_04215 | Not Available | - | 936265 - 936672 | 15116.0 |
| succinate dehydrogenase iron-sulfur subunit | PQ457_04220 | Q1RGP3 | - | 936827 - 937609 | 29321.1 |
| ribonuclease e/g | PQ457_04225 | P44443 | - | 937905 - 940688 | 101543.0 |
| hypothetical protein | PQ457_04230 | Not Available | - | 940612 - 941049 | 15359.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.