Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | PQ457_04135 | Not Available | - | 916121 - 916384 | 9419.16 |
| gnat family n-acetyltransferase | PQ457_04140 | Not Available | - | 916505 - 917539 | 37838.9 |
| acyl-coa ligase (amp-forming), exosortase a system-associated | PQ457_04145 | B0CN26 | + | 917566 - 919134 | 56284.7 |
| pyridoxal-dependent decarboxylase, exosortase a system-associated | PQ457_04150 | Q2L4H3 | + | 919131 - 920360 | 42938.1 |
| polysaccharide export protein | PQ457_04155 | Q8ZNQ9 | + | 920666 - 921310 | 22886.9 |
| gnvr domain-containing protein | PQ457_04160 | Not Available | + | 921326 - 922855 | 55157.9 |
| aaa family atpase | PQ457_04165 | P71051 | + | 922866 - 923942 | 37542.7 |
| preprotein translocase subunit yajc | PQ457_04170 | Not Available | + | 923949 - 925979 | 72438.9 |
| xrta-associated atpase | PQ457_04175 | P45754 | + | 926000 - 927202 | 43400.1 |
| duf3473 domain-containing protein | PQ457_04180 | P02963 | + | 927229 - 928131 | 33890.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.