Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ457_04085 | P30864 | + | 905528 - 906436 | 32842.6 |
| fadr/gntr family transcriptional regulator | PQ457_04090 | P31475 | + | 906532 - 907278 | 26979.2 |
| p-hydroxycinnamoyl coa hydratase/lyase | PQ457_04095 | O69762 | + | 907462 - 908313 | 32022.4 |
| acetate--coa ligase family protein | PQ457_04100 | A0A2P1BT06 | + | 908339 - 910450 | 72516.7 |
| helix-turn-helix domain-containing protein | PQ457_04105 | B7LVD8 | - | 910481 - 911326 | 30788.6 |
| 4-hydroxybenzoate 3-monooxygenase | PQ457_04110 | P00438 | + | 911451 - 912620 | 42663.0 |
| hypothetical protein | PQ457_04115 | Not Available | - | 912654 - 913382 | 25844.7 |
| thioredoxin-disulfide reductase | PQ457_04120 | Q4ULP1 | + | 913594 - 914571 | 34177.7 |
| hydrolase 1, exosortase a system-associated | PQ457_04125 | Not Available | - | 914592 - 915377 | 27188.7 |
| hypothetical protein | PQ457_04130 | Not Available | - | 915374 - 916066 | 24228.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.