Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | PQ457_04035 | Q9ABX9 | + | 892975 - 895698 | 98985.6 |
| translation elongation factor 4 | PQ457_04040 | Q2G550 | + | 895827 - 897644 | 67166.1 |
| duf779 domain-containing protein | PQ457_04045 | Not Available | - | 897820 - 898140 | 11244.6 |
| hamp domain-containing sensor histidine kinase | PQ457_04050 | P0A601 | + | 898236 - 899441 | 42644.9 |
| response regulator transcription factor | PQ457_04055 | A3Q5L9 | + | 899441 - 900118 | 24056.3 |
| tonb-dependent receptor | PQ457_04060 | Not Available | + | 900237 - 902666 | 85196.9 |
| hypothetical protein | PQ457_04065 | Not Available | + | 902775 - 903314 | 18832.2 |
| ycei family protein | PQ457_04070 | Q48PB8 | - | 903393 - 904001 | 21117.2 |
| nad(p)h-dependent oxidoreductase | PQ457_04075 | Q0C3K3 | - | 904014 - 904598 | 20130.9 |
| class iii extradiol ring-cleavage dioxygenase | PQ457_04080 | Q70FG7 | - | 904638 - 905414 | 28298.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.