Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_03985 | Not Available | - | 879721 - 880728 | 37616.5 |
| hypothetical protein | PQ457_03990 | P42217 | - | 880713 - 881630 | 33569.5 |
| polysaccharide biosynthesis/export family protein | PQ457_03995 | P22236 | + | 881810 - 882955 | 39265.7 |
| capsular biosynthesis protein | PQ457_04000 | P57038 | - | 883018 - 884151 | 41665.4 |
| sugar phosphate nucleotidyltransferase | PQ457_04005 | P0C7J3 | + | 884911 - 885948 | 36634.7 |
| class i mannose-6-phosphate isomerase | PQ457_04010 | O31646 | + | 885986 - 886798 | 29776.9 |
| kpsf/gutq family sugar-phosphate isomerase | PQ457_04015 | O67500 | + | 886885 - 887898 | 35174.1 |
| dna polymerase iii subunit beta | PQ457_04020 | P0CAU5 | + | 888212 - 889330 | 40455.5 |
| diguanylate cyclase | PQ457_04025 | Q9ABX9 | - | 890170 - 891345 | 42383.9 |
| fad-dependent oxidoreductase | PQ457_04030 | P22570 | - | 891447 - 892748 | 46076.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.