Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase family protein | PQ457_03835 | Q47281 | - | 842162 - 844504 | 87775.6 |
| restriction endonuclease subunit s | PQ457_03840 | Q58615 | - | 844501 - 845757 | 47071.1 |
| n-6 dna methylase | PQ457_03845 | Q47282 | - | 845754 - 847205 | 54204.1 |
| site-specific integrase | PQ457_03850 | B1J1V8 | - | 847248 - 848345 | 41074.2 |
| helix-turn-helix domain-containing protein | PQ457_03855 | Not Available | - | 848348 - 848827 | 17648.7 |
| helix-turn-helix domain-containing protein | PQ457_03860 | P22876 | - | 848832 - 848999 | 6160.55 |
| hypothetical protein | PQ457_03865 | Not Available | - | 849118 - 850104 | 36954.5 |
| tyrosine-type recombinase/integrase | PQ457_03870 | P08320 | - | 850149 - 851390 | 45879.0 |
| Trna-thr | Not Available | Not Available | + | 851556 - 851630 | Not Available |
| hypothetical protein | PQ457_03880 | Not Available | - | 851671 - 852597 | 33064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.