Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | PQ457_03785 | A0QRG8 | + | 824625 - 825689 | 37940.8 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | PQ457_03790 | P58363 | + | 825748 - 829182 | 121209.0 |
| response regulator transcription factor | PQ457_03795 | A8R3T0 | - | 829376 - 830002 | 21515.2 |
| acetate--coa ligase | PQ457_03800 | Q2G512 | - | 830184 - 832133 | 71317.5 |
| dcap family trimeric outer membrane transporter | PQ457_03805 | Not Available | + | 832381 - 833874 | 52893.4 |
| mfs transporter | PQ457_03810 | A4QH18 | + | 833924 - 835690 | 63109.8 |
| gnat family n-acetyltransferase | PQ457_03815 | Q9HT95 | + | 835811 - 836332 | 19108.2 |
| amp-binding protein | PQ457_03820 | P28812 | + | 836374 - 838263 | 67700.4 |
| hypothetical protein | PQ457_03825 | Not Available | - | 838260 - 838931 | 23744.9 |
| tonb-dependent receptor | PQ457_03830 | P46359 | + | 839461 - 841896 | 87689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.