Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | PQ457_03735 | Q6DRD9 | - | 811982 - 812839 | 30762.7 |
| tetr/acrr family transcriptional regulator | PQ457_03740 | P96701 | - | 812836 - 813510 | 24715.1 |
| mfs transporter | PQ457_03745 | A0QYL8 | + | 813636 - 814877 | 43588.6 |
| cystathionine beta-lyase | PQ457_03750 | Q52811 | - | 815132 - 816367 | 43935.5 |
| 3-mercaptopyruvate sulfurtransferase | PQ457_03755 | P58388 | - | 816475 - 817338 | 30906.6 |
| hypothetical protein | PQ457_03760 | Not Available | - | 817479 - 818978 | 51945.4 |
| preq(1) synthase | PQ457_03765 | Q2G586 | + | 819267 - 819737 | 17232.4 |
| rna degradosome polyphosphate kinase | PQ457_03770 | Q2NC49 | + | 819835 - 822036 | 82008.7 |
| exopolyphosphatase | PQ457_03775 | Q9X8H1 | + | 822048 - 823565 | 52975.4 |
| udp-2,3-diacylglucosamine diphosphatase | PQ457_03780 | Q1QVV3 | + | 823660 - 824628 | 35803.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.