Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | PQ457_03685 | Q2RV14 | - | 803698 - 804201 | 18253.4 |
| 6-phosphogluconolactonase | PQ457_03690 | Q9A6N1 | - | 804241 - 804861 | 21597.1 |
| response regulator | PQ457_03695 | O25153 | + | 805227 - 805718 | 18311.3 |
| dna starvation/stationary phase protection protein | PQ457_03700 | P73321 | - | 805763 - 806218 | 16445.4 |
| hypothetical protein | PQ457_03705 | Not Available | - | 806370 - 806939 | 19345.2 |
| group iii truncated hemoglobin | PQ457_03710 | Q0PB48 | - | 806936 - 807313 | 14284.4 |
| hypothetical protein | PQ457_03715 | Not Available | - | 807324 - 807545 | 8229.83 |
| low molecular weight phosphotyrosine protein phosphatase | PQ457_03720 | P41893 | + | 807710 - 808183 | 16608.5 |
| ai-2e family transporter | PQ457_03725 | O32086 | + | 808253 - 809296 | 36627.9 |
| tonb-dependent receptor | PQ457_03730 | P46359 | + | 809438 - 811753 | 82792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.