Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | PQ457_03435 | Not Available | - | 752952 - 753440 | 16953.3 |
| alpha/beta hydrolase | PQ457_03440 | P59588 | + | 753576 - 754529 | 34895.9 |
| fad-dependent oxidoreductase | PQ457_03445 | Q9HXE3 | + | 754547 - 755632 | 38449.7 |
| hypothetical protein | PQ457_03450 | Not Available | - | 755682 - 755948 | 9864.42 |
| heme exporter protein ccmb | PQ457_03455 | P29960 | - | 756157 - 756819 | 22038.1 |
| heme abc exporter atp-binding protein ccma | PQ457_03460 | Q2G9A9 | - | 756816 - 757418 | 20946.6 |
| dna-3-methyladenine glycosylase 2 family protein | PQ457_03465 | Q92383 | - | 757671 - 758288 | 22034.6 |
| 2fe-2s iron-sulfur cluster-binding protein | PQ457_03470 | Q5S3I4 | + | 758447 - 758764 | 11162.1 |
| cysteine synthase a | PQ457_03475 | P50867 | + | 758937 - 759944 | 35589.6 |
| hypothetical protein | PQ457_03480 | Not Available | + | 759963 - 760280 | 10783.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.