Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | PQ457_03335 | Not Available | + | 726053 - 726874 | 29929.4 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | PQ457_03340 | A5VPI9 | + | 727014 - 729107 | 78316.4 |
| xdhc family protein | PQ457_03345 | P77183 | - | 729374 - 730219 | 29176.3 |
| alpha glucosidase | PQ457_03350 | Q9Z3R8 | - | 730230 - 731831 | 59025.3 |
| glycogen/starch/alpha-glucan phosphorylase | PQ457_03355 | Q8CI94 | + | 732155 - 734569 | 90056.9 |
| 1,4-alpha-glucan branching protein glgb | PQ457_03360 | Q2G7S5 | + | 734583 - 736754 | 80430.9 |
| glucose-1-phosphate adenylyltransferase | PQ457_03365 | Q2G7S6 | + | 736768 - 738033 | 47106.4 |
| glycogen synthase glga | PQ457_03370 | Q2G7S7 | + | 738048 - 739562 | 52699.4 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | PQ457_03375 | P39671 | + | 739559 - 741211 | 57602.2 |
| glycogen debranching protein glgx | PQ457_03380 | A8GKU9 | + | 741211 - 743016 | 64766.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.