Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m67 family metallopeptidase | PQ457_03285 | D4GTS4 | + | 716544 - 716939 | 14106.9 |
| histidine phosphotransferase family protein | PQ457_03290 | Q2YQA5 | + | 716995 - 717654 | 22725.7 |
| n-acetylmuramoyl-l-alanine amidase | PQ457_03295 | P75820 | + | 717694 - 718431 | 27661.8 |
| tonb-dependent receptor | PQ457_03300 | O52903 | - | 718685 - 721624 | 104257.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 721933 - 722346 | Not Available |
| duf3828 domain-containing protein | PQ457_03310 | Not Available | + | 722409 - 722888 | 17901.5 |
| translation initiation factor if-3 | PQ457_03315 | Q5NL80 | - | 723004 - 723522 | 19765.1 |
| ligase-associated dna damage response endonuclease pdem | PQ457_03320 | Q60344 | - | 723667 - 724344 | 24552.7 |
| oxygen-dependent coproporphyrinogen oxidase | PQ457_03325 | B0T8D1 | + | 724424 - 725284 | 31723.1 |
| superoxide dismutase family protein | PQ457_03330 | O66602 | + | 725343 - 725903 | 18766.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.