Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quinohemoprotein amine dehydrogenase maturation protein | PQ457_03185 | Q02550 | - | 694419 - 695870 | 52429.4 |
| quinohemoprotein amine dehydrogenase subunit alpha | PQ457_03190 | Not Available | - | 695867 - 697555 | 60299.4 |
| molybdopterin-dependent oxidoreductase | PQ457_03195 | Q51698 | - | 697882 - 700065 | 77221.6 |
| (2fe-2s)-binding protein | PQ457_03200 | Q51697 | - | 700062 - 700550 | 17006.7 |
| tetr family transcriptional regulator | PQ457_03205 | P22645 | + | 700687 - 701355 | 24528.6 |
| mfs transporter | PQ457_03210 | Not Available | + | 701425 - 702642 | 41066.9 |
| amine dehydrogenase large subunit | PQ457_03215 | P84888 | + | 702719 - 703885 | 41535.5 |
| methylamine utilization protein maue | PQ457_03220 | P29896 | + | 703885 - 704460 | 19914.3 |
| methylamine utilization protein maud | PQ457_03225 | Q49126 | + | 704465 - 705064 | 20783.8 |
| methylamine dehydrogenase light chain | PQ457_03230 | Q50425 | + | 705099 - 705641 | 19400.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.