Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | PQ457_03135 | Q8GGD4 | - | 680670 - 682025 | 47865.9 |
| l-serine ammonia-lyase | PQ457_03140 | O86564 | + | 682128 - 683495 | 47699.3 |
| hypothetical protein | PQ457_03145 | Not Available | + | 683602 - 684333 | 26806.6 |
| sulfotransferase | PQ457_03150 | O67178 | - | 684363 - 686453 | 76301.0 |
| tonb-dependent receptor | PQ457_03155 | P48632 | + | 686846 - 689464 | 94807.3 |
| s8 family serine peptidase | PQ457_03160 | P00780 | - | 689575 - 690240 | 22810.7 |
| abc transporter atp-binding protein | PQ457_03165 | Q1QX69 | - | 690233 - 691909 | 59973.3 |
| hypothetical protein | PQ457_03170 | Not Available | - | 691927 - 692931 | 35374.7 |
| hypothetical protein | PQ457_03175 | Not Available | - | 692928 - 694028 | 40622.8 |
| quinohemoprotein amine dehydrogenase subunit gamma | PQ457_03180 | P0A181 | - | 694081 - 694422 | 12478.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.