Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe2+-dependent dioxygenase | PQ457_03085 | A1W3D7 | + | 669680 - 670363 | 25002.2 |
| heme-binding beta-barrel domain-containing protein | PQ457_03090 | Not Available | + | 670383 - 671024 | 23504.7 |
| urate hydroxylase puud | PQ457_03095 | Not Available | + | 671123 - 672304 | 42880.5 |
| potassium transporter kup | PQ457_03100 | Q2G870 | + | 672415 - 674355 | 68946.5 |
| duf4118 domain-containing protein | PQ457_03105 | P21865 | + | 674374 - 675771 | 48989.3 |
| response regulator transcription factor | PQ457_03110 | P9WGN0 | + | 675768 - 676448 | 23819.0 |
| acyltransferase family protein | PQ457_03115 | O05402 | + | 676494 - 678521 | 73059.9 |
| molybdate abc transporter substrate-binding protein | PQ457_03120 | Q8PHA1 | + | 678609 - 679370 | 26082.5 |
| molybdate abc transporter permease subunit | PQ457_03125 | P0AF02 | + | 679351 - 680055 | 24532.1 |
| atp-binding cassette domain-containing protein | PQ457_03130 | Q2W1R8 | + | 680045 - 680668 | 22844.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.