Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | PQ457_02985 | Q9I310 | - | 639275 - 641239 | 70973.0 |
| tonb-dependent receptor | PQ457_02990 | Not Available | - | 641494 - 643977 | 89211.8 |
| hamp domain-containing sensor histidine kinase | PQ457_02995 | P0DMK6 | - | 644205 - 645572 | 48793.3 |
| response regulator transcription factor | PQ457_03000 | O07776 | - | 645560 - 646246 | 24745.1 |
| laci family dna-binding transcriptional regulator | PQ457_03005 | Q57PK6 | + | 646412 - 647413 | 35818.3 |
| pilus assembly protein tade | PQ457_03010 | Not Available | - | 647485 - 648108 | 22107.8 |
| pilus assembly protein | PQ457_03015 | Not Available | - | 648105 - 648692 | 21157.0 |
| pilus assembly protein | PQ457_03020 | Not Available | - | 648692 - 650608 | 69006.0 |
| hypothetical protein | PQ457_03025 | Not Available | + | 650891 - 651262 | 13202.5 |
| patatin-like phospholipase family protein | PQ457_03030 | Not Available | - | 651400 - 652596 | 43890.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.