Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1674 domain-containing protein | PQ457_02935 | Not Available | - | 629830 - 630021 | 7107.14 |
| rsmb/nop family class i sam-dependent rna methyltransferase | PQ457_02940 | A6TEU2 | + | 630076 - 631314 | 43574.6 |
| hypothetical protein | PQ457_02945 | Not Available | - | 631324 - 631629 | 10859.4 |
| peptide-methionine (s)-s-oxide reductase msra | PQ457_02950 | B2VHZ5 | - | 631728 - 632258 | 19260.8 |
| n-carbamoylputrescine amidase | PQ457_02955 | Q9XGI9 | + | 632356 - 633228 | 32053.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | PQ457_02960 | P72736 | + | 633212 - 633730 | 18869.2 |
| Trna-lys | Not Available | Not Available | + | 633757 - 633832 | Not Available |
| hypothetical protein | PQ457_02970 | Not Available | - | 634110 - 634505 | 14649.5 |
| glycosyltransferase family 39 protein | PQ457_02975 | Not Available | + | 634928 - 636478 | 57716.6 |
| tonb-dependent receptor | PQ457_02980 | P46359 | - | 636653 - 638959 | 83146.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.