Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | PQ457_02885 | Q54MZ9 | + | 615088 - 615963 | 30059.5 |
| tonb-dependent receptor | PQ457_02890 | P46359 | - | 616003 - 618510 | 90050.1 |
| peptide-methionine (r)-s-oxide reductase msrb | PQ457_02895 | Q3SJU1 | + | 618723 - 619124 | 14768.1 |
| pbp1a family penicillin-binding protein | PQ457_02900 | P70997 | + | 619294 - 621345 | 73321.8 |
| do family serine endopeptidase | PQ457_02905 | Q2YMX6 | - | 621593 - 623116 | 52323.4 |
| protease modulator hflc | PQ457_02910 | P44545 | - | 623253 - 624125 | 32462.0 |
| protease modulator hflk | PQ457_02915 | Q9KV09 | - | 624122 - 625312 | 43709.8 |
| mrp/nbp35 family atp-binding protein | PQ457_02920 | P72190 | + | 625492 - 626502 | 34386.8 |
| molybdopterin-dependent oxidoreductase | PQ457_02925 | Q51698 | + | 626510 - 628777 | 79103.2 |
| ferrochelatase | PQ457_02930 | P57779 | + | 628783 - 629811 | 37376.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.