Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cmcj/nvfi family oxidoreductase | PQ457_02835 | A0A2Z4HPZ8 | - | 604663 - 605454 | 28906.9 |
| duf3237 domain-containing protein | PQ457_02840 | B3Q9N8 | - | 605466 - 605963 | 18852.3 |
| pqq-binding-like beta-propeller repeat protein | PQ457_02845 | Q8GR64 | - | 605976 - 608159 | 77687.3 |
| hypothetical protein | PQ457_02850 | Not Available | - | 608156 - 609034 | 33427.4 |
| nuclear transport factor 2 family protein | PQ457_02855 | Not Available | + | 609186 - 609578 | 14387.3 |
| nuclear transport factor 2 family protein | PQ457_02860 | Not Available | + | 609690 - 610073 | 14460.2 |
| sdr family oxidoreductase | PQ457_02865 | O31680 | + | 610100 - 610855 | 26388.1 |
| aldehyde dehydrogenase | PQ457_02870 | H1ZV37 | - | 610919 - 612409 | 52327.2 |
| sdr family oxidoreductase | PQ457_02875 | P39315 | - | 612406 - 613362 | 34211.6 |
| carotenoid oxygenase family protein | PQ457_02880 | Q52008 | - | 613366 - 614880 | 55310.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.