Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | PQ457_02785 | Q12FQ6 | - | 593375 - 595561 | 78415.1 |
| nitronate monooxygenase | PQ457_02790 | P71847 | + | 595756 - 596760 | 34909.6 |
| hypothetical protein | PQ457_02795 | Not Available | + | 596760 - 597095 | 12497.8 |
| hypothetical protein | PQ457_02800 | Not Available | - | 597092 - 597475 | 13977.9 |
| cytochrome c | PQ457_02805 | Not Available | - | 597475 - 597885 | 14443.8 |
| fad-dependent oxidoreductase | PQ457_02810 | P56216 | - | 597882 - 599459 | 57841.3 |
| tonb-dependent receptor | PQ457_02815 | P46359 | - | 599603 - 601993 | 86477.7 |
| marr family winged helix-turn-helix transcriptional regulator | PQ457_02820 | Q88FY0 | + | 602197 - 602709 | 18532.3 |
| nuclear transport factor 2 family protein | PQ457_02825 | Not Available | - | 602694 - 603395 | 26776.7 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_02830 | Q01198 | + | 603485 - 604414 | 33331.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.