Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translocation/assembly module tamb domain-containing protein | PQ457_02735 | E1WAU5 | + | 580565 - 584791 | 147933.0 |
| type i glutamate--ammonia ligase | PQ457_02740 | Q59747 | - | 585129 - 586538 | 51808.5 |
| p-ii family nitrogen regulator | PQ457_02745 | P21193 | - | 586681 - 587019 | 12143.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | PQ457_02750 | C1D141 | - | 587360 - 588286 | 32053.5 |
| sh3 domain-containing protein | PQ457_02755 | Not Available | - | 588283 - 588573 | 9991.12 |
| hypothetical protein | PQ457_02760 | Not Available | - | 588690 - 589046 | 12915.8 |
| leucyl aminopeptidase family protein | PQ457_02765 | A7NG41 | - | 589097 - 590530 | 50529.6 |
| duf4163 domain-containing protein | PQ457_02770 | Not Available | + | 590641 - 591468 | 29312.7 |
| type i methionyl aminopeptidase | PQ457_02775 | Q9ZCD3 | + | 591515 - 592339 | 29672.9 |
| sulfite exporter taue/safe family protein | PQ457_02780 | O34430 | - | 592396 - 593172 | 26808.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.