Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| scpa family protein | PQ457_02685 | Q83CP8 | + | 569899 - 570693 | 29574.1 |
| smc-scp complex subunit scpb | PQ457_02690 | Q3A508 | + | 570690 - 571298 | 21860.2 |
| twin-arginine translocase tata/tate family subunit | PQ457_02695 | Q2G9D4 | + | 571400 - 571645 | 8669.44 |
| sec-independent protein translocase protein tatb | PQ457_02700 | Q2G9D3 | + | 571690 - 572136 | 16142.4 |
| twin-arginine translocase subunit tatc | PQ457_02705 | A0L833 | + | 572140 - 572931 | 28747.1 |
| amidohydrolase | PQ457_02710 | A0A1I9LN01 | - | 573166 - 574857 | 59852.6 |
| nad(p)-dependent oxidoreductase | PQ457_02715 | O33730 | - | 574854 - 575762 | 31944.3 |
| threonine ammonia-lyase | PQ457_02720 | Q74FW6 | + | 575902 - 577152 | 44749.2 |
| arginyltransferase | PQ457_02725 | Q2G9C7 | + | 577376 - 578287 | 33914.0 |
| bama/tama family outer membrane protein | PQ457_02730 | D2TN56 | + | 578238 - 580565 | 81784.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.