Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | PQ457_02635 | Q13EZ9 | - | 560270 - 560998 | 25983.5 |
| aspartate kinase | PQ457_02640 | Q88EI9 | + | 561093 - 562331 | 43978.6 |
| hypothetical protein | PQ457_02645 | Not Available | + | 562518 - 562742 | 7826.4 |
| ribonuclease hi | PQ457_02650 | Q2G9E3 | - | 562792 - 563232 | 16481.8 |
| homoserine kinase | PQ457_02655 | B1M3E0 | - | 563229 - 564203 | 34571.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | PQ457_02660 | Q16AJ6 | - | 564216 - 565190 | 35129.1 |
| hypothetical protein | PQ457_02665 | Not Available | + | 565285 - 565938 | 22356.8 |
| arginine--trna ligase | PQ457_02670 | Q2G9D9 | + | 566000 - 567757 | 62964.1 |
| hypothetical protein | PQ457_02675 | Not Available | + | 567761 - 568810 | 35283.7 |
| beta-n-acetylhexosaminidase | PQ457_02680 | Q0A911 | + | 568874 - 569902 | 36214.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.