Novosphingobium humi R1-4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium humi
StrainR1-4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium humi R1-4

Accession NumberCP117417.1

Gene Summary

Adenine Count

624047 bp

Thymine Count

625173 bp

Guanine Count

1097387 bp

Cytosine Count

1092600 bp

Genome Length

3439207 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
zinc-dependent metalloproteasePQ457_02485Not Available-527843 - 53027586746.6
lrp/asnc family transcriptional regulatorPQ457_02490Q9I1M3+530447 - 53094118420.3
tonb-dependent receptorPQ457_02495O52903+531330 - 534341105752.0
amidohydrolasePQ457_02500P76052+534393 - 53594655733.7
hesa/moeb/thif family proteinPQ457_02505D4GSF3-536074 - 53683826074.2
chromosomal replication initiator protein dnaaPQ457_02510Q1GN68-537270 - 53867352140.1
30s ribosomal protein s20PQ457_02515Q2G300-539234 - 5394949343.4
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyasePQ457_02520Q2GAT0-539664 - 54047929238.5
class i sam-dependent methyltransferasePQ457_02525Q9X3X2+540579 - 54132828101.6
2-polyprenylphenol 6-hydroxylasePQ457_02530A1U669+541334 - 54289057869.2

Displaying genes 621 – 630 of 4435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites