Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | PQ457_02335 | Q12BV1 | + | 502539 - 503609 | 40509.7 |
| marr family transcriptional regulator | PQ457_02340 | O33817 | + | 503683 - 504156 | 17734.5 |
| acyl-coa dehydrogenase family protein | PQ457_02345 | Q5LLW7 | - | 504407 - 506104 | 58865.8 |
| marr family transcriptional regulator | PQ457_02350 | Not Available | + | 506254 - 506691 | 15701.0 |
| m14-type cytosolic carboxypeptidase | PQ457_02355 | P30795 | - | 506695 - 507831 | 41803.0 |
| duf4136 domain-containing protein | PQ457_02360 | P30794 | - | 507855 - 508436 | 19691.6 |
| hypothetical protein | PQ457_02365 | Not Available | - | 508481 - 509182 | 24207.6 |
| udp-glucose 4-epimerase gale | PQ457_02370 | Q59083 | + | 509372 - 510391 | 36286.5 |
| type b 50s ribosomal protein l36 | PQ457_02375 | Q2G365 | + | 510463 - 510588 | 5082.31 |
| had family phosphatase | PQ457_02380 | P58422 | + | 510756 - 511373 | 23341.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.