Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | PQ457_02285 | Not Available | + | 492801 - 493673 | 32454.2 |
| glutathione s-transferase family protein | PQ457_02290 | P30347 | + | 493702 - 494478 | 29494.0 |
| aminomethyl transferase family protein | PQ457_02295 | G2IQS7 | + | 494626 - 496032 | 52417.8 |
| alpha/beta hydrolase | PQ457_02300 | F4JRA6 | + | 496315 - 496980 | 24285.0 |
| hypothetical protein | PQ457_02305 | Not Available | - | 496977 - 497372 | 15149.8 |
| voc family protein | PQ457_02310 | Q9XI31 | - | 497411 - 497806 | 14434.2 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_02315 | Q01198 | - | 497803 - 498705 | 32558.7 |
| mfs transporter | PQ457_02320 | A0QYL8 | + | 498881 - 500284 | 49842.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | PQ457_02325 | Q1JUP4 | + | 500281 - 501708 | 50244.8 |
| duf2490 domain-containing protein | PQ457_02330 | Q49116 | + | 501836 - 502501 | 24296.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.