Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | PQ457_02235 | P75757 | - | 478942 - 479922 | 34073.0 |
| tonb-dependent receptor | PQ457_02240 | Not Available | + | 480248 - 482797 | 91439.0 |
| monofunctional biosynthetic peptidoglycan transglycosylase | PQ457_02245 | Q9ABA6 | - | 483128 - 483784 | 24237.2 |
| ubia family prenyltransferase | PQ457_02250 | P55585 | - | 483973 - 485427 | 52296.5 |
| hypothetical protein | PQ457_02255 | Not Available | - | 485417 - 486664 | 43363.8 |
| eama family transporter | PQ457_02260 | Q02R28 | - | 486664 - 487023 | 12189.7 |
| protocatechuate 4,5-dioxygenase subunit alpha | PQ457_02265 | P22635 | + | 487338 - 487751 | 14623.3 |
| class iii extradiol dioxygenase family protein | PQ457_02270 | P22636 | + | 487744 - 488586 | 30973.9 |
| pqq-dependent dehydrogenase, methanol/ethanol family | PQ457_02275 | Q8GR64 | + | 488762 - 490900 | 76543.1 |
| aldehyde dehydrogenase family protein | PQ457_02280 | O34660 | + | 491032 - 492543 | 53176.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.