Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme o synthase | PQ457_02135 | Q2G9W3 | + | 464287 - 465240 | 34408.9 |
| hypothetical protein | PQ457_02140 | Not Available | + | 465237 - 465365 | 4681.03 |
| cytochrome c oxidase assembly protein | PQ457_02145 | A5VP42 | + | 465370 - 465933 | 20320.4 |
| cytochrome c oxidase subunit 3 | PQ457_02150 | P06030 | + | 466087 - 466917 | 31027.8 |
| duf983 domain-containing protein | PQ457_02155 | Not Available | + | 466910 - 467311 | 13572.5 |
| surf1 family protein | PQ457_02160 | Not Available | + | 467308 - 467949 | 23354.0 |
| threonine synthase | PQ457_02165 | P29363 | + | 468185 - 469600 | 50465.9 |
| class i sam-dependent methyltransferase | PQ457_02170 | B5XY38 | + | 469600 - 470484 | 32883.0 |
| dihydroneopterin aldolase | PQ457_02175 | Not Available | + | 470834 - 471205 | 13710.5 |
| hypothetical protein | PQ457_02180 | Not Available | + | 471207 - 471536 | 11193.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.