Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_02085 | Not Available | - | 455700 - 455849 | 5518.02 |
| holliday junction resolvase ruvx | PQ457_02090 | Q2G9X2 | - | 455843 - 456322 | 16878.6 |
| duf3089 domain-containing protein | PQ457_02095 | Not Available | - | 456310 - 457500 | 42484.0 |
| ai-2e family transporter | PQ457_02100 | O32095 | - | 457508 - 458605 | 38943.4 |
| signal peptidase i | PQ457_02105 | P0A1W3 | - | 458607 - 459485 | 31983.1 |
| holo-acp synthase | PQ457_02110 | A1AZ41 | - | 459500 - 459901 | 14077.2 |
| pyridoxine 5'-phosphate synthase | PQ457_02115 | Q2RT91 | - | 459920 - 460663 | 26817.1 |
| orotate phosphoribosyltransferase | PQ457_02120 | Q2G9W6 | - | 460663 - 461247 | 20719.3 |
| cytochrome c oxidase subunit ii | PQ457_02125 | Q1RI44 | + | 461494 - 462447 | 33914.3 |
| cytochrome c oxidase subunit i | PQ457_02130 | P31833 | + | 462472 - 464160 | 61966.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.