Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gguc family protein | PQ457_02035 | Not Available | + | 444713 - 445705 | 35257.6 |
| gfo/idh/moca family oxidoreductase | PQ457_02040 | Q53TZ2 | + | 445709 - 446629 | 33233.8 |
| Trna-val | Not Available | Not Available | + | 446760 - 446835 | Not Available |
| eal domain-containing protein | PQ457_02050 | Q9ABX9 | - | 446856 - 449120 | 82920.5 |
| methyl-accepting chemotaxis protein | PQ457_02055 | P55652 | - | 449298 - 450776 | 52624.3 |
| tlpa disulfide reductase family protein | PQ457_02060 | P43221 | - | 450896 - 451441 | 18570.9 |
| argininosuccinate lyase | PQ457_02065 | Q2G4W0 | + | 451512 - 452885 | 49119.4 |
| hypothetical protein | PQ457_02070 | Not Available | + | 452914 - 453135 | 7819.16 |
| diaminopimelate decarboxylase | PQ457_02075 | Q9Z661 | + | 453176 - 454438 | 44239.1 |
| nad(p)-dependent oxidoreductase | PQ457_02080 | Q606C9 | + | 454677 - 455465 | 27757.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.