Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1593 domain-containing protein | PQ457_01985 | Not Available | - | 427615 - 429081 | 52827.5 |
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | PQ457_01990 | Q59219 | - | 429160 - 430734 | 57707.3 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | PQ457_01995 | Q5BFG8 | - | 430740 - 432956 | 77823.1 |
| tonb-dependent receptor | PQ457_02000 | P46359 | - | 433069 - 435351 | 81549.5 |
| beta-galactosidase | PQ457_02005 | P94804 | + | 435733 - 437802 | 76041.5 |
| fadr/gntr family transcriptional regulator | PQ457_02010 | P31460 | + | 437845 - 438615 | 27553.0 |
| dihydroxy-acid dehydratase family protein | PQ457_02015 | Q9A9Z2 | - | 438662 - 440452 | 64148.9 |
| galactose mutarotase | PQ457_02020 | P05149 | - | 440464 - 441603 | 40418.0 |
| sugar mfs transporter | PQ457_02025 | Q2YIJ8 | + | 441770 - 443077 | 46387.6 |
| aldehyde dehydrogenase (nadp(+)) | PQ457_02030 | Q08IB7 | + | 443134 - 444660 | 51573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.