Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | PQ457_01835 | Not Available | - | 392988 - 393368 | 12908.2 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | PQ457_01840 | P72324 | - | 393385 - 394497 | 39434.7 |
| Trna-cys | Not Available | Not Available | + | 394774 - 394847 | Not Available |
| integrase arm-type dna-binding domain-containing protein | PQ457_01850 | P39347 | + | 395014 - 396243 | 45829.5 |
| hypothetical protein | PQ457_01855 | Not Available | + | 396207 - 397139 | 34388.7 |
| dna-binding protein | PQ457_01860 | Not Available | + | 397299 - 397472 | 6078.52 |
| hypothetical protein | PQ457_01865 | Not Available | + | 397547 - 398050 | 18928.2 |
| hypothetical protein | PQ457_01870 | Not Available | + | 398255 - 398629 | 13415.1 |
| type iv secretion system dna-binding domain-containing protein | PQ457_01875 | P09130 | + | 398626 - 400449 | 66960.8 |
| mobf family relaxase | PQ457_01880 | P14565 | + | 400449 - 403190 | 96966.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.