Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr01841 family phasin | PQ457_01785 | Not Available | - | 381137 - 382105 | 33791.5 |
| alpha/beta fold hydrolase | PQ457_01790 | P50176 | - | 382417 - 384261 | 68016.8 |
| ll-diaminopimelate aminotransferase | PQ457_01795 | O87320 | + | 384709 - 385911 | 43776.6 |
| winged helix-turn-helix domain-containing protein | PQ457_01800 | Q52990 | + | 386116 - 386826 | 26474.0 |
| nuclear transport factor 2 family protein | PQ457_01805 | Not Available | - | 387085 - 387495 | 15036.9 |
| formate dehydrogenase subunit delta | PQ457_01810 | Not Available | - | 387498 - 387707 | 7378.9 |
| formate dehydrogenase subunit alpha | PQ457_01815 | O34720 | - | 387704 - 390538 | 102169.0 |
| molybdenum cofactor guanylyltransferase | PQ457_01820 | C3MDF9 | - | 390528 - 391061 | 18179.0 |
| nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing protein | PQ457_01825 | P56913 | - | 391058 - 392569 | 52711.3 |
| nad(p)h-dependent oxidoreductase subunit e | PQ457_01830 | P56910 | - | 392566 - 392988 | 14867.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.