Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation:dicarboxylase symporter family transporter | PQ457_01735 | O59010 | + | 370636 - 371907 | 42779.2 |
| sigma-70 family rna polymerase sigma factor | PQ457_01740 | B3Q6P8 | - | 371904 - 372482 | 21244.4 |
| nepr family anti-sigma factor | PQ457_01745 | Not Available | - | 372479 - 372598 | 4530.28 |
| chase domain-containing protein | PQ457_01750 | B2SB67 | + | 372903 - 374570 | 60755.4 |
| response regulator | PQ457_01755 | Q0PEV3 | - | 374561 - 375325 | 27064.7 |
| n-acetyltransferase | PQ457_01760 | A0A0H3C8X0 | - | 375620 - 376771 | 43154.4 |
| sterol desaturase family protein | PQ457_01765 | O48916 | - | 376901 - 377785 | 33468.1 |
| lps export abc transporter permease lptg | PQ457_01770 | P0ADC7 | - | 377966 - 379060 | 39711.7 |
| lps export abc transporter permease lptf | PQ457_01775 | P0AFA0 | - | 379057 - 380286 | 45183.4 |
| atp-dependent clp protease adapter clps | PQ457_01780 | Q2W899 | - | 380484 - 380855 | 13773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.