Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | PQ457_01685 | Q2G2Z4 | - | 357293 - 358930 | 57321.3 |
| co-chaperone groes | PQ457_01690 | Q2GCC7 | - | 358977 - 359264 | 10096.3 |
| mate family efflux transporter | PQ457_01695 | Q7WJR0 | - | 359400 - 360785 | 48623.6 |
| efflux transporter outer membrane subunit | PQ457_01700 | Q9WWZ8 | - | 360878 - 362290 | 48223.4 |
| cusa/czca family heavy metal efflux rnd transporter | PQ457_01705 | P94177 | - | 362287 - 365466 | 113342.0 |
| efflux rnd transporter periplasmic adaptor subunit | PQ457_01710 | Q8CWA2 | - | 365463 - 366722 | 44121.7 |
| tigr00730 family rossman fold protein | PQ457_01715 | Q84MC2 | + | 366976 - 367863 | 33415.2 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | PQ457_01720 | P61422 | - | 367871 - 368698 | 28236.0 |
| duf1272 domain-containing protein | PQ457_01725 | P42878 | - | 368695 - 368919 | 8191.77 |
| phosphoglucosamine mutase | PQ457_01730 | Q2GB44 | - | 369134 - 370474 | 47090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.