Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | PQ457_01635 | Q2GBN7 | + | 343876 - 344940 | 38430.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | PQ457_01640 | Q3J2B7 | + | 344937 - 345791 | 29750.4 |
| duf4167 domain-containing protein | PQ457_01645 | Not Available | + | 346027 - 347046 | 37967.3 |
| apolipoprotein n-acyltransferase | PQ457_01650 | Q89WA1 | + | 347109 - 348749 | 58836.0 |
| methionine adenosyltransferase | PQ457_01655 | A5VBQ3 | + | 348803 - 350017 | 42927.5 |
| universal stress protein | PQ457_01660 | P73475 | + | 350189 - 350971 | 28006.7 |
| mechanosensitive ion channel | PQ457_01665 | Q58543 | - | 351500 - 352603 | 39459.8 |
| dna polymerase i | PQ457_01670 | Q9S1G2 | - | 352603 - 355452 | 102800.0 |
| hypothetical protein | PQ457_01675 | Not Available | + | 355712 - 355900 | 5714.47 |
| class a beta-lactamase-related serine hydrolase | PQ457_01680 | P35393 | - | 356070 - 357107 | 36163.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.