Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | PQ457_01585 | Not Available | - | 333244 - 333900 | 23197.8 |
| mosc domain-containing protein | PQ457_01590 | P32157 | + | 334063 - 334719 | 23750.3 |
| rna polymerase factor sigma-54 | PQ457_01595 | P30333 | - | 334716 - 336230 | 54742.3 |
| lps export abc transporter atp-binding protein | PQ457_01600 | P33982 | - | 336257 - 337042 | 28159.2 |
| hypothetical protein | PQ457_01605 | Not Available | + | 337239 - 337679 | 15654.4 |
| metallopeptidase tldd-related protein | PQ457_01610 | P0AFK1 | + | 337765 - 339111 | 46549.1 |
| inorganic diphosphatase | PQ457_01615 | Q89WY0 | - | 339168 - 339707 | 19914.6 |
| duf1345 domain-containing protein | PQ457_01620 | Not Available | - | 339847 - 340524 | 24669.2 |
| peptidase m61 | PQ457_01625 | Not Available | - | 340525 - 342486 | 72250.2 |
| histidine--trna ligase | PQ457_01630 | Q2GBN6 | + | 342637 - 343875 | 45038.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.