Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | PQ457_22055 | P55412 | - | 3529 - 4737 | 44063.7 |
| helix-turn-helix transcriptional regulator | PQ457_22060 | P55411 | - | 4734 - 4997 | 9389.46 |
| pd-(d/e)xk nuclease family protein | PQ457_22065 | Not Available | + | 5175 - 6485 | 49098.7 |
| atp-binding protein | PQ457_22070 | Q09803 | - | 6508 - 8460 | 72474.3 |
| wyl domain-containing protein | PQ457_22075 | Not Available | + | 8636 - 9613 | 36715.2 |
| pd-(d/e)xk nuclease family protein | PQ457_22080 | Not Available | + | 9675 - 12386 | 96484.4 |
| uvrd-helicase domain-containing protein | PQ457_22085 | B1I493 | + | 12379 - 15528 | 112228.0 |
| carboxylesterase family protein | PQ457_22090 | D2D3B6 | - | 15537 - 17075 | 53936.6 |
| response regulator transcription factor | PQ457_22095 | G3XCY6 | + | 17241 - 17960 | 26863.6 |
| hamp domain-containing sensor histidine kinase | PQ457_22100 | Q9HZ47 | + | 17957 - 19321 | 49441.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.