Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | PQ457_01535 | A6VCX3 | - | 323595 - 324116 | 18863.7 |
| nadp-dependent malic enzyme | PQ457_01540 | O30808 | - | 324177 - 326453 | 81957.0 |
| dna mismatch repair protein muts | PQ457_01545 | Q2N5V9 | + | 326603 - 329185 | 91952.8 |
| hypothetical protein | PQ457_01550 | Not Available | + | 329235 - 329441 | 7141.32 |
| hypothetical protein | PQ457_01555 | Not Available | - | 329445 - 329855 | 14580.6 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | PQ457_01560 | Q45223 | - | 329935 - 330804 | 30530.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | PQ457_01565 | Q1LJ80 | - | 330825 - 331397 | 19826.6 |
| hig1 domain-containing protein | PQ457_01570 | Not Available | - | 331417 - 331647 | 8165.41 |
| trna glutamyl-q(34) synthetase gluqrs | PQ457_01575 | O68142 | - | 331669 - 332514 | 30337.3 |
| hnh endonuclease | PQ457_01580 | Q6NKI3 | + | 332617 - 333225 | 23570.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.