Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | PQ457_21750 | P76113 | - | 21635 - 22669 | 36813.7 |
| nuclear transport factor 2 family protein | PQ457_21755 | Not Available | + | 22812 - 23222 | 15055.0 |
| lysr family transcriptional regulator | PQ457_21760 | P72131 | - | 23274 - 24164 | 32212.0 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | PQ457_21765 | Q9I702 | + | 24252 - 25748 | 53047.1 |
| acyl-coa dehydrogenase family protein | PQ457_21770 | Q54IM8 | + | 25755 - 26897 | 40707.8 |
| enoyl-coa hydratase/isomerase family protein | PQ457_21775 | Q5ZJ60 | + | 26894 - 27982 | 38601.4 |
| enoyl-coa hydratase-related protein | PQ457_21780 | P64017 | + | 27979 - 28761 | 27761.8 |
| 3-hydroxyisobutyrate dehydrogenase | PQ457_21785 | P63936 | + | 28815 - 29684 | 29037.1 |
| beta-ketothiolase bktb | PQ457_21790 | Q0KBP1 | + | 29706 - 30905 | 40848.3 |
| enoyl-coa hydratase-related protein | PQ457_21795 | P77467 | + | 30905 - 31696 | 27429.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.