Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3237 domain-containing protein | PQ457_21545 | B3Q9N8 | - | 1293879 - 1294334 | 16173.5 |
| flavin-dependent oxidoreductase | PQ457_21550 | Q9HWG9 | - | 1294318 - 1295625 | 46874.6 |
| pepsy-associated tm helix domain-containing protein | PQ457_21555 | Not Available | - | 1295971 - 1297194 | 44877.2 |
| tonb-dependent siderophore receptor | PQ457_21560 | P16869 | - | 1297198 - 1299324 | 77199.5 |
| laci family dna-binding transcriptional regulator | PQ457_21565 | B5F6L7 | - | 1299469 - 1300506 | 37153.1 |
| tonb-dependent receptor | PQ457_21570 | P46359 | + | 1300966 - 1303158 | 77925.9 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | PQ457_21575 | P14002 | + | 1303271 - 1305484 | 77565.6 |
| carboxylesterase family protein | PQ457_21580 | Q47M62 | + | 1305489 - 1306982 | 51660.5 |
| sugar phosphate isomerase/epimerase | PQ457_21585 | Q8XP74 | - | 1307024 - 1307977 | 34871.7 |
| dmt family transporter | PQ457_21590 | P39314 | - | 1308073 - 1309023 | 33238.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.