Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_21445 | Not Available | - | 1272199 - 1272411 | 7782.38 |
| nitroreductase family protein | PQ457_21450 | P41401 | - | 1272895 - 1273482 | 20958.6 |
| diguanylate cyclase | PQ457_21455 | Q55434 | - | 1273678 - 1274712 | 38407.9 |
| chemotaxis response regulator protein-glutamate methylesterase | PQ457_21460 | Q394I6 | - | 1274709 - 1275734 | 36009.7 |
| hybrid sensor histidine kinase/response regulator | PQ457_21465 | P18769 | - | 1275731 - 1277962 | 81045.0 |
| chemotaxis protein chew | PQ457_21470 | Q52881 | - | 1277959 - 1278471 | 18818.0 |
| methyltransferase domain-containing protein | PQ457_21475 | Q9HXT5 | - | 1278612 - 1279871 | 45932.3 |
| chemotaxis protein chew | PQ457_21480 | Not Available | - | 1279868 - 1280296 | 15713.3 |
| methyl-accepting chemotaxis protein | PQ457_21485 | P39214 | - | 1280329 - 1281900 | 56246.1 |
| eal domain-containing protein | PQ457_21490 | O34311 | + | 1282164 - 1284071 | 68713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.