Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | PQ457_01485 | Not Available | + | 315211 - 316350 | 41955.4 |
| hypothetical protein | PQ457_01490 | Not Available | - | 316367 - 316726 | 12770.9 |
| rna polymerase-binding protein dksa | PQ457_01495 | P0CAU3 | + | 317019 - 317477 | 17322.4 |
| pilz domain-containing protein | PQ457_01500 | Not Available | + | 317580 - 317987 | 14532.5 |
| abc transporter substrate-binding protein | PQ457_01505 | Q46863 | + | 318072 - 319556 | 53314.9 |
| response regulator transcription factor | PQ457_01510 | P0CAW8 | + | 319705 - 320400 | 25884.5 |
| hypothetical protein | PQ457_01515 | Not Available | - | 320471 - 320647 | 5721.56 |
| trna (guanine(46)-n(7))-methyltransferase trmb | PQ457_01520 | Q2GBM0 | + | 320729 - 321448 | 27147.6 |
| deor/glpr family dna-binding transcription regulator | PQ457_01525 | P0ACK4 | + | 321584 - 322354 | 26791.5 |
| mfs transporter | PQ457_01530 | Q7CH99 | + | 322375 - 323514 | 38288.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.