Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copg family ribbon-helix-helix protein | PQ457_21095 | Q8U3X9 | + | 1171410 - 1171904 | 18076.8 |
| urea carboxylase-associated family protein | PQ457_21100 | O31473 | + | 1171901 - 1172725 | 29368.0 |
| urea carboxylase-associated family protein | PQ457_21105 | O31473 | + | 1172743 - 1173378 | 22796.0 |
| urea carboxylase | PQ457_21110 | A5H0J2 | + | 1173375 - 1176971 | 129506.0 |
| allophanate hydrolase | PQ457_21115 | Q936X2 | + | 1176968 - 1178728 | 61315.1 |
| ynce family protein | PQ457_21120 | Not Available | + | 1178743 - 1179687 | 32859.6 |
| urca family protein | PQ457_21125 | Not Available | - | 1179719 - 1180057 | 11396.7 |
| hypothetical protein | PQ457_21130 | Not Available | - | 1180147 - 1180506 | 12765.6 |
| sulfotransferase | PQ457_21135 | O67178 | - | 1180564 - 1182156 | 58121.3 |
| sterol desaturase family protein | PQ457_21140 | Q5M8F9 | + | 1182304 - 1183296 | 37754.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.