Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | PQ457_20995 | Not Available | + | 1147689 - 1148564 | 31158.1 |
| doxx family protein | PQ457_21000 | P0AD47 | + | 1148568 - 1149011 | 15633.4 |
| alginate export family protein | PQ457_21005 | Not Available | + | 1149004 - 1150368 | 48747.7 |
| yoak family protein | PQ457_21010 | O34343 | + | 1150384 - 1151055 | 22277.1 |
| gnat family n-acetyltransferase | PQ457_21015 | Q66IM5 | + | 1151084 - 1151380 | 10756.8 |
| triple tyrosine motif-containing protein | PQ457_21020 | P9WGK2 | + | 1151387 - 1154329 | 106244.0 |
| dihydrolipoamide acetyltransferase family protein | PQ457_21025 | Q9I1M0 | - | 1154336 - 1155514 | 42349.9 |
| alpha-ketoacid dehydrogenase subunit beta | PQ457_21030 | Q9I1M1 | - | 1155518 - 1156531 | 36694.2 |
| thiamine pyrophosphate-dependent enzyme | PQ457_21035 | Q9I1M2 | - | 1156536 - 1157765 | 45177.7 |
| coa ester lyase | PQ457_21040 | P9WPE0 | - | 1157966 - 1158814 | 28988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.