Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hsp33 family molecular chaperone hslo | PQ457_01340 | P58097 | + | 292835 - 293704 | 32062.2 |
| hypothetical protein | PQ457_01440 | Not Available | - | 309561 - 310040 | 17577.8 |
| deda family protein | PQ457_01445 | P44832 | + | 310224 - 310874 | 22888.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | PQ457_01450 | Q93UV0 | - | 311116 - 312315 | 43067.5 |
| acyl carrier protein | PQ457_01455 | O51647 | - | 312321 - 312560 | 8572.14 |
| response regulator | PQ457_01460 | B2SB45 | - | 312639 - 313016 | 13466.5 |
| duf3572 domain-containing protein | PQ457_01465 | Not Available | + | 313089 - 313379 | 10097.0 |
| had family hydrolase | PQ457_01470 | Not Available | + | 313379 - 314008 | 23239.5 |
| rida family protein | PQ457_01475 | O96876 | + | 314001 - 314465 | 15577.0 |
| glycerophosphodiester phosphodiesterase family protein | PQ457_01480 | O07592 | + | 314468 - 315214 | 27358.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.