Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | PQ457_20895 | B0SW61 | + | 1126447 - 1126857 | 14381.2 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | PQ457_20900 | P27034 | - | 1126900 - 1129395 | 88580.9 |
| tonb-dependent receptor | PQ457_20905 | P46359 | - | 1129496 - 1131700 | 78755.7 |
| marr family transcriptional regulator | PQ457_20910 | B0FXI7 | + | 1132019 - 1132483 | 17323.0 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | PQ457_20915 | Q7X281 | + | 1132558 - 1134861 | 84078.6 |
| thioesterase family protein | PQ457_20920 | Q31ME5 | + | 1134874 - 1135278 | 14846.4 |
| marr family transcriptional regulator | PQ457_20925 | O07458 | + | 1135318 - 1135815 | 18521.1 |
| fumarylacetoacetate hydrolase family protein | PQ457_20930 | Q6GLT8 | - | 1135865 - 1136776 | 32526.1 |
| cupin domain-containing protein | PQ457_20935 | Q9S3U6 | - | 1136807 - 1137931 | 41742.1 |
| carbon-nitrogen hydrolase family protein | PQ457_20940 | Q89PT3 | + | 1138071 - 1139012 | 33254.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.