Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase subunit alpha | PQ457_20845 | O07835 | - | 1116219 - 1118351 | 76533.0 |
| cyclase family protein | PQ457_20850 | A0NLY7 | - | 1118358 - 1119113 | 26882.6 |
| sodium:solute symporter family protein | PQ457_20855 | O07556 | - | 1119188 - 1120645 | 51629.8 |
| duf3311 domain-containing protein | PQ457_20860 | Not Available | - | 1120642 - 1120857 | 8173.2 |
| lysr family transcriptional regulator | PQ457_20865 | P27111 | - | 1120968 - 1121888 | 33377.4 |
| dihydrodipicolinate synthase family protein | PQ457_20870 | Q8PXL7 | + | 1122070 - 1122996 | 32900.6 |
| fad-dependent oxidoreductase | PQ457_20875 | Q92XP5 | + | 1123000 - 1124187 | 42056.2 |
| (2fe-2s)-binding protein | PQ457_20880 | G3XD67 | + | 1124184 - 1124477 | 10297.5 |
| fad-dependent oxidoreductase | PQ457_20885 | P72300 | + | 1124474 - 1125844 | 47832.6 |
| voc family protein | PQ457_20890 | A1YPR3 | + | 1125946 - 1126434 | 17736.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.