Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PQ457_20795 | P77569 | - | 1105327 - 1106142 | 29256.4 |
| tm-1-like atp-binding domain-containing protein | PQ457_20800 | Q893M2 | + | 1106277 - 1107515 | 43260.2 |
| hypothetical protein | PQ457_20805 | Q06881 | + | 1107512 - 1107970 | 15769.7 |
| biotin carboxylase n-terminal domain-containing protein | PQ457_20810 | Q06862 | + | 1107982 - 1109310 | 46691.3 |
| biotin carboxyl carrier protein | PQ457_20815 | Q58628 | + | 1109313 - 1110794 | 53493.8 |
| had hydrolase-like protein | PQ457_20820 | Q4L4U2 | + | 1110781 - 1111629 | 29793.3 |
| tonb-dependent receptor plug domain-containing protein | PQ457_20825 | A5F9G0 | - | 1111647 - 1113176 | 54359.7 |
| helix-turn-helix transcriptional regulator | PQ457_20830 | Q47129 | - | 1113338 - 1113625 | 10678.8 |
| rieske 2fe-2s domain-containing protein | PQ457_20835 | P94679 | + | 1113551 - 1114498 | 34719.2 |
| indolepyruvate oxidoreductase subunit beta family protein | PQ457_20840 | Not Available | - | 1114777 - 1116207 | 51188.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.