Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | PQ457_20745 | P09788 | - | 1094737 - 1096356 | 58105.1 |
| cytochrome c | PQ457_20750 | P09787 | - | 1096353 - 1096673 | 11398.1 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_20755 | P87219 | - | 1096670 - 1097509 | 29031.9 |
| 2,4'-dihydroxyacetophenone dioxygenase family protein | PQ457_20760 | Not Available | - | 1097523 - 1098056 | 20148.8 |
| 2,4'-dihydroxyacetophenone dioxygenase family protein | PQ457_20765 | Not Available | - | 1098079 - 1098612 | 20137.7 |
| tonb-dependent receptor | PQ457_20770 | P46359 | - | 1098680 - 1101235 | 91167.5 |
| helix-turn-helix domain-containing protein | PQ457_20775 | B1Q2A8 | - | 1101368 - 1102306 | 34473.1 |
| mfs transporter | PQ457_20780 | O51798 | - | 1102326 - 1103564 | 43501.4 |
| voc family protein | PQ457_20785 | O58010 | - | 1103561 - 1104115 | 20265.9 |
| nad(p)-dependent alcohol dehydrogenase | PQ457_20790 | O94564 | - | 1104183 - 1105199 | 34808.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.